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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12525684 chr6:26483910 A/C ZNF322B chr9:99957633-99961910:- 0.42 7.06 7.82E-12 Box Plot
BLCA rs12525810 chr6:26623511 T/TA ZNF322B chr9:99957633-99961910:- 0.53 9.45 3.55E-19 Box Plot
BLCA rs12525813 chr6:19358341 C/G REG1B chr2:79312156-79315145:- 0.33 6.01 4.39E-9 Box Plot
BLCA rs12526680 chr6:26550954 A/G ZNF322B chr9:99957633-99961910:- 0.48 8.51 3.92E-16 Box Plot
BLCA rs12532475 chr7:33091021 G/A FKBP9L chr7:55748767-55780945:- 0.27 6.06 3.34E-9 Box Plot
BLCA rs12532549 chr7:67887396 G/A MT4 chr16:56598961-56602869:+ 0.32 6.03 3.96E-9 Box Plot
BLCA rs12532569 chr7:67887455 G/A MT4 chr16:56598961-56602869:+ 0.32 6.04 3.67E-9 Box Plot
BLCA rs12534887 chr7:54396110 A/G PRDM15 chr21:43218385-43299591:- -0.29 -5.99 4.73E-9 Box Plot
BLCA rs12539690 chr7:54331887 C/T PRDM15 chr21:43218385-43299591:- -0.29 -5.96 5.69E-9 Box Plot
BLCA rs12544916 chr8:13475151 C/G BIN3 chr8:22477931-22526661:- 0.47 6.43 3.72E-10 Box Plot
BLCA rs12544916 chr8:13475151 C/G CHMP7 chr8:23101150-23119513:+ 0.5 6.45 3.38E-10 Box Plot
BLCA rs12544916 chr8:13475151 C/G CNOT7 chr8:17082473-17104387:- 0.59 7.5 4.37E-13 Box Plot
BLCA rs12544916 chr8:13475151 C/G ELP3 chr8:27947190-28048673:+ 0.51 6.02 4.08E-9 Box Plot
BLCA rs12544916 chr8:13475151 C/G FBXO25 chr8:356428-427967:+ 0.5 5.99 4.91E-9 Box Plot
BLCA rs12544916 chr8:13475151 C/G INTS10 chr8:19674651-19709594:+ 0.47 6 4.46E-9 Box Plot